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View Structure Prediction Details

Protein: YBEY_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 155 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBEY_PHOLL.

Description E-value Query
Range
Subject
Range
gi|37197841, gi|... - gi|37679099|ref|NP_933708.1| putative metalloprotease [Vibrio vulnificus YJ016], gi|37197841|dbj|BAC...
224.0 [0..4] [155..99]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVILDLQI ACEHSQGLPK ETLFQHWLDG VLPQFQSESE VTIRIVDEAE SHDLNLTYRG  60
   61 KNKPTNVLSF PFEAPPEIDL PLLGDLIICR QVVEKEAEEQ QKTIEEHWAH MVVHGCLHLL 120
  121 GYDHIEDDEA EEMESLETEI MQKLGYADPY LAEKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.0
Match: 1xaxA
Description: NMR structure of HI0004, a putative essential gene product from Haemophilus influenzae
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle