YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|37524405, gi|...
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 135 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37524405, gi|....

Description E-value Query
Range
Subject
Range
gi|71735354, gi|... - gi|71735354|ref|YP_272975.1| OsmC/Ohr family protein [Pseudomonas syringae pv. phaseolicola 1448A], ...
144.0 [0..1] [134..63]

Back

Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQARVKWVEG LSLLGESSSG HQIMMDGNAG DKAPSPMEMV LMAAGGCSTI DVVSILHKGR  60
   61 YDIRDCEVKL TSRRREEPPR LFTHINLHFI VTGKDLIDKA VERAVMLSAE KYCSVALMLG 120
  121 KSVEITHSFE VKDID

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.0
Match: 1ml8A
Description: Hypothetical protein in CRP region
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.0998435033416311 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle