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View Structure Prediction Details

Protein: PCO2_ARATH
Organism: Arabidopsis thaliana
Length: 276 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCO2_ARATH.

Description E-value Query
Range
Subject
Range
gi|10176982 - gi|10176982|dbj|BAB10214.1| unnamed protein product [Arabidopsis thaliana]
421.0 [0..7] [276..1]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTDTVMSGR VRKDLSKTNP NGNIPENRSN SRKKIQRRSK KTLICPVQKL FDTCKKVFAD  60
   61 GKSGTVPSQE NIEMLRAVLD EIKPEDVGVN PKMSYFRSTV TGRSPLVTYL HIYACH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFSICIFCLP PSGVIPLHNH PEMTVFSKLL FGTMHIKSYD WVPDSPQPSS DTRLAKVKVD  60
   61 SDFTAPCDTS ILYPADGGNM HCFTAKTACA VLDVIGPPYS DPAGRHCTYY FDYPFSSFSV 120
  121 DGVVVAEEEK EGYAWLKERE EKPEDLTVTA LMYSGPTIKE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.221849
Match: 2b5hA
Description: No description for 2b5hA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle