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View Structure Prediction Details

Protein: gi|18417250, gi|...
Organism: Arabidopsis thaliana
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18417250, gi|....

Description E-value Query
Range
Subject
Range
gi|42573071 - gi|42573071|ref|NP_974632.1| pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana]
265.0 [0..1] [401..1]

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Predicted Domain #1
Region A:
Residues: [1-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCFTHVPPL PLFSTSGIYL PASRRFTRIR MSSSSSIDSV PPPPDNAIVL GCGGIAVDFL  60
   61 ATVDSYPQAD DKIRSTSLKV QGGGNAANAL TCAARLGLNS RLISKVANDS QGKGMLEELE 120
  121 ADGVDTSFIV VSKEGNSPFT YILVDNQTKT RTCIHTPGDP PMLPTDLSQS SMLSALDRAS 180
  181 IVYFDVRLHE TALVIAKEAS RKKIPILVDT EKKRDGLDDL LPFADYVVCP ENFPQTWTEV 240
  241 SSTPGALVSM LLRLPKLKFV IVTSGEHGCL MVQRASKEVF ESQETDIESL LETLKHRKDS 300
  301 TTTFPTCVSS ETTKLKANGV GTMTGRLFLG TAEKIPPEEL VDTTGAGDAF IGAVLYAICA 360
  361 GMPPEKMLPF AAQVAGCSCR ALGARTGLPH RTDPRLVPFL V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.045757
Match: 2qcvA
Description: No description for 2qcvA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle