| Protein: | FTSHA_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 813 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FTSHA_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
560.0 | [0..1] | [813..1] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MIFSKLGSSL ARSSRSKGFV YGGGVRSAVF NQGRLRAPQN LEAAVNQVDG GLGFLRRHFA 60
61 SFAARKGLEA GDLSRAFANP RLRRFFSSQT PKKKNYENYY PKDSKKAPKN EQKSESRDGS 120
121 KKNENENAG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.573 | a.7.8 | GAT domain |
| View | Download | 0.446 | a.24.4 | Hemerythrin |
| View | Download | 0.422 | a.47.2 | t-snare proteins |
| View | Download | 0.421 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.416 | c.78.2 | Aspartate/glutamate racemase |
|
Region A: Residues: [130-310] |
1 11 21 31 41 51
| | | | | |
1 DAFSNEYQNM LIPLMAIALI LSTFSLGSRE QQQISFQEFK NKLLEAGLVD HIDVSNKEVA 60
61 KVYVRSSPKS QTTEEVVQGP GNGVPAKGRG GQYKYYFNIG SVESFEEKLE EAQEAIGVNS 120
121 HDFVPVTYVS ETIWYQELLR FAPTLLLVAT LIFGARRMQG GLGGLGGPGG KAGRGIFNIG 180
181 K
|
| Detection Method: | |
| Confidence: | 16.107905 |
| Match: | PF06480.6 |
| Description: | No description for PF06480.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [311-572] |
1 11 21 31 41 51
| | | | | |
1 AQITRADKNS KNKIYFKDVA GCEEAKQEIM EFVHFLQNPK KYEDLGAKIP KGALLVGPPG 60
61 TGKTLLAKAT AGESAVPFLS ISGSDFMEMF VGVGPSRVRN LFQEARQCAP SIIFIDEIDA 120
121 IGRARGRGGF SGGNDEREST LNQLLVEMDG FGTTAGVVVL AGTNRPDILD KALLRPGRFD 180
181 RQITIDKPDI KGRDQIFQIY LKKIKLDHEP SYYSQRLAAL TPGFAGADIA NVCNEAALIA 240
241 ARHEGATVTM AHFDSAIDRV IG
|
| Detection Method: | |
| Confidence: | 69.69897 |
| Match: | 1lv7A |
| Description: | AAA domain of cell division protein FtsH |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 2.18454736627863 | bayes_pls_golite062009 |
| binding | 1.52219026232071 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.428373955572763 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.424644011903671 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.424583288440993 | bayes_pls_golite062009 |
| nucleotide binding | 0.422354428195324 | bayes_pls_golite062009 |
| nucleic acid binding | 0.192553066860219 | bayes_pls_golite062009 |
| ATP binding | 0.04834397972685 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.0149501427627318 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.00365326483311895 | bayes_pls_golite062009 |
|
Region A: Residues: [573-687] |
1 11 21 31 41 51
| | | | | |
1 GLEKKNRVIS KLERRTVAYH ESGHAVAGWF LEHAEPLLKV TIVPRGTAAL GFAQYVPNEN 60
61 LLMTKEQLFD MTCMTLGGRA AEQVLIGRIS TGAQNDLEKV TKMTYAQVAV YGFSD
|
| Detection Method: | |
| Confidence: | 6.27 |
| Match: | 2di4A |
| Description: | No description for 2di4A was found. |
|
Region A: Residues: [688-813] |
1 11 21 31 41 51
| | | | | |
1 KIGLLSFPQR EDEFSKPYSN RTGAMIDEEV REWVGKAYKR TVELIEEHKE QVAQIAELLL 60
61 EKEVLHQDDL TKVLGERPFK SGETTNYDRF KSGFEESEKE SQKESVPVKP VEDDGIPPLE 120
121 PQVVPT
|
| Detection Method: | |
| Confidence: | 115.0 |
| Match: | 2ce7A |
| Description: | EDTA treated |
Matching Structure (courtesy of the PDB): |
|
