| Protein: | SIA1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 474 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SIA1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
509.0 | [0..7] | [471..13] |
|
|
507.0 | [0..1] | [471..1] |
|
|
504.0 | [0..1] | [471..1] |
|
|
482.0 | [0..26] | [468..34] |
|
|
478.0 | [0..2] | [468..3] |
|
|
475.0 | [0..7] | [468..15] |
|
|
432.0 | [0..63] | [474..12] |
|
|
395.0 | [0..2] | [422..10] |
|
|
390.0 | [0..1] | [465..1] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MRSHQAGRKL PLLQLLGCVA VFSVFVFTIQ SSFFADNNRK LDLQPEDIQI LSDFQSSVQQ 60
61 CVANRGLGLS AHIIDHCNLI LKFPEGTNST
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.387 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.383 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.372 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.364 | d.74.5 | Hypothetical protein Yml108w |
|
Region A: Residues: [91-223] |
1 11 21 31 41 51
| | | | | |
1 WYNAQFKVFE ALEFKYNVCE AVLLWEQYRN MTTVLTREYL DVRPDGWLDY AAMRIAQLGA 60
61 DKCYNRTLCE EHLNVILPAK PPFHPRQFHK CAVVGNSGDL LKTEFGEEID SHDAVFRDNE 120
121 APVNEKYAKY VGV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.459 | N/A | N/A | d.58.22 | TRADD, N-terminal domain |
| View | Download | 0.459 | N/A | N/A | d.58.22 | TRADD, N-terminal domain |
| View | Download | 0.458 | N/A | N/A | c.23.3 | Hypothetical protein MTH538 |
| View | Download | 0.458 | N/A | N/A | c.23.3 | Hypothetical protein MTH538 |
| View | Download | 0.381 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.381 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.365 | N/A | N/A | d.58.59 | Description not found. |
| View | Download | 0.352 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.352 | N/A | N/A | a.118.8 | TPR-like |
|
Region A: Residues: [224-347] |
1 11 21 31 41 51
| | | | | |
1 KRDFRLVVRG AARNMIKILN GSDNEVLIIK SVTHRDFNEM IKRIPNPVYL FQGIVLRRGA 60
61 KGTGMKSIEL ALSMCDIVDI YGFTVDPGYT EWTRYFSTPR KGHNPLQGRA YYQLLECLGV 120
121 IRIH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.636 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.552 | N/A | N/A | a.279.1 | Description not found. |
| View | Download | 0.547 | N/A | N/A | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.547 | N/A | N/A | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.517 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.515 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.515 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.489 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
|
Region A: Residues: [348-474] |
1 11 21 31 41 51
| | | | | |
1 SPMRSERKED WSSVPSREMI SRAHTAALRL QRSQQPTSSK RDGSGQFGNC KVWGDADPTK 60
61 GPVSGSPDMS ETRKKSNYKK WEVMPFRSLR KEARDHYIQM KGVSQYKMDG NKLDDLVCVR 120
121 HPLKLDT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.500 | d.26.1 | FKBP-like |
| View | Download | 0.476 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.451 | d.24.1 | Pili subunits |
| View | Download | 0.449 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.438 | a.246.1 | Description not found. |
| View | Download | 0.327 | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.321 | d.26.1 | FKBP-like |
| View | Download | 0.313 | a.1.1 | Globin-like |
