| Protein: | CcapR-PA |
| Organism: | Drosophila melanogaster |
| Length: | 506 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CcapR-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
303.0 | [0..98] | [422..361] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MLHLRLFDSS LYYTLASASE SSGLASSTST ERSFNGTQGA GGVAAGGESL TPTDVAAVNL 60
61 TYFTPAISHV MLAPTTIATT TASATMVQIQ TTAAPSHDL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [100-506] |
1 11 21 31 41 51
| | | | | |
1 ETGGNSTSSD PGEFDNLNSF YFYETEQFAV LWILFTVIVL GNSAVLFVMF INKNRKSRMN 60
61 YFIKQLALAD LCVGLLNVLT DIIWRITISW RAGNLACKAI RFSQVCVTYS STYVLVAMSI 120
121 DRYDAITHPM NFSKSWKRAR HLVAGAWLIS ALFSLPILVL YEEKLIQGHP QCWIELGSPI 180
181 AWQVYMSLVS ATLFAIPALI ISACYAIIVK TIWAKGSIFV PTERAGFGAA PARRASSRGI 240
241 IPRAKVKTVK MTLTIVFVFI ICWSPYIIFD LLQVFGQIPH SQTNIAIATF IQSLAPLNSA 300
301 ANPLIYCLFS SQVFRTLSRF PPFKWFTCCC KSYRNNSQQN RCHTVGRRLH NSCDSMRTLT 360
361 TSLTVSRRST NKTNARVVIC ERPTKVVTVP AMSERRGVSL KGNTDIL
|
| Detection Method: | |
| Confidence: | 41.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
