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View Structure Prediction Details

Protein: ACFR1_ARATH
Organism: Arabidopsis thaliana
Length: 239 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACFR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|109492061 - gi|109492061|ref|XP_001081563.1| PREDICTED: similar to Cytochrome b561 (Cytochrome b-561) [Rattus no...
258.0 [0..2] [234..281]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVRINAMAV TFVAHALAVI AAIMVLVWSI SYRGGLAWEA TNKNLIFNLH PVLMLIGFII  60
   61 LGGEAIISYK SLPLEKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [78-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKKLIHLILH AIALALGIFG ICAAFKNHNE SHIPNLYSLH SWIGIGVISL YGFQWVYSFI  60
   61 VFFFPGGSTN LKSGLLPWHA MLGLFVYILA VGNAALGFLE KLTFLENGGL DKYGSEAFLI 120
  121 NFTAIITILF GAFVVLTASA ESPSPSPSVS NDDSVDFSYS AI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.34
Match: 1kqfC
Description: Formate dehydrogenase N, cytochrome (gamma) subunit
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.585723167263354 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle