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View Structure Prediction Details

Protein: gi|30689611, gi|...
Organism: Arabidopsis thaliana
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30689611, gi|....

Description E-value Query
Range
Subject
Range
gi|90411273, gi|... - gi|90411273|ref|ZP_01219285.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium profund...
267.0 [0..3] [347..66]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKIIDVAYG ASVKAGLTLL EKNLLPDLVI RRLIRLLLAS RLRSVYKPTA EMQLSDLLRF  60
   61 VDSLKKMPIA INTETAKTQH YEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.69897
Match: 1tw2A
Description: Crystal structure of Carminomycin-4-O-methyltransferase (DnrK) in complex with S-adenosyl-L-homocystein (SAH) and 4-methoxy-e-rhodomycin T (M-ET)
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [84-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTAFFEHALG RNIKYSCCYY SNDSSSLEEA GEAMLALSCE RAKVEDGQSV LDIGCGWGSL  60
   61 TLYIARKYSK CKLTGICNSK TQKAFIDEKC RKLGLQNVEI IAADISTFEH EGTYDRIFSI 120
  121 EMFEHMKNYG ELLKKIGNWM KEDSLLFVHY LCHKTYAYHF EDVNDDDWIT RHFFSGGTMP 180
  181 SADLLLYFQE NVSIMDHWLV NGTHYAKTSE EWLKGMDKEI VAVKEIMEVT YGKEEAVKWT 240
  241 VYWRTFFIAL AELFAYNNGD EWMIAHFLFK KK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.221849
Match: 1kp9A
Description: CmaA1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.723277178398499 bayes_pls_golite062009
transferase activity 0.64512166557639 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.54403439349476 bayes_pls_golite062009
methyltransferase activity 0.54389223881989 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle