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View Structure Prediction Details

Protein: gi|30681321, gi|...
Organism: Arabidopsis thaliana
Length: 171 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30681321, gi|....

Description E-value Query
Range
Subject
Range
gi|25402571, gi|... - pir||C86231 hypothetical protein [imported] - Arabidopsis thaliana, gi|2160182|gb|AAB60745.1| ESTs ...
145.0 [0..1] [171..1]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVSGSLNCV VVAVDGSEVS MEALRWALDN LKLSSSSSDS SFVVLHVQPS PSVAAGVSPG  60
   61 TIPFGGPSGL EVPAFTAAIE QHQKRITDTI LEHASQICAE KSVNVKTQVV IGDPKYKICE 120
  121 AVENLHADLL VMGSRAYGRI KRMFLGSVSN YCTNHAHCPV VIIKPKEDSS A

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Detection Method: PSI-BLAST
Confidence: 29.221849
Match: 1mjhA
Description: "Hypothetical" protein MJ0577
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.298809327772818 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle