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View Structure Prediction Details

Protein: gi|18417492, gi|...
Organism: Arabidopsis thaliana
Length: 548 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18417492, gi|....

Description E-value Query
Range
Subject
Range
gi|30685081 - gi|30685081|ref|NP_850822.1| mannosyltransferase, putative [Arabidopsis thaliana]
345.0 [0..1] [527..1]

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Predicted Domain #1
Region A:
Residues: [1-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIRKRKNAG GDGDGGADGA SVNVGDEPDS FGGRIGSPRR IFLFCLAFRV VNALLIQTYF  60
   61 NPDEHWQSLE VAHRTIFGYG YMTWEWKRGI RSYLHPMLFA FLYKLLQVTG LDTPYIMIKA 120
  121 PRLMQSIFSA IGDLYLYKLS DALYGGNVAT WSLFCQMANW FIFFCLNRTF SNCLETVLTI 180
  181 MGLYYWPCIR DSSIDYPVNR KWGLVIAALA CAIRPTSAVI WLYVGMLELF LTPNKVKFII 240
  241 LEVIPIGSLV LGFTCLLDRL MYGSWVIVPL NFLKFNFL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [279-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSGGDYYGTH PWHWYFTQGF LVMLFTFTPF SIAGIIKSKN QKLSALILWV LAIYSILGHK  60
   61 EFRFVLPVLP IALIFSGYAF AQMEVSGSSS SSSVTKKKQV PRQNHTKWSP KLRLSVYFLL 120
  121 ATNIPMALYM SLFHQRG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [416-548]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEDAMNYLSD EAYKGRVKSI LFLMPCHSTP YYSTLHRNIP MQFLDCTPSA EKGELDESDQ  60
   61 FLVNPLGFAS ELARNWSEPP SHIVLFASEE TKLRDFMIQH SFKEVRRFFH AHFKVDRDLQ 120
  121 SSVVVYVVNH AFP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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