YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SPC3B_ARATH
Organism: Arabidopsis thaliana
Length: 167 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPC3B_ARATH.

Description E-value Query
Range
Subject
Range
SPC3A_ARATH - Signal peptidase complex subunit 3A OS=Arabidopsis thaliana GN=At3g05230 PE=2 SV=1
238.0 [0..1] [167..1]

Back

Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSFGYRANA LLTFAVTILA FICAIASFSD NFSNQNPSAQ IQILNINWFQ KQPHGNDEVS  60
   61 LTLNITADLQ SLFTWNTKQV FAFVAAEYET SKNALNQVSL WDAIIPEKEH AKFWIQISNK 120
  121 YRFIDQGHNL RGKDFNLTLH WHVMPKTGKM FADKIVMSGY RLPNAYR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 92.481486
Match: PF04573.3
Description: No description for PF04573.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle