| Protein: | CG9850-PB |
| Organism: | Drosophila melanogaster |
| Length: | 476 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9850-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
331.0 | [0..2] | [455..566] |
|
Region A: Residues: [1-315] |
1 11 21 31 41 51
| | | | | |
1 MCRRRKGGRC TKGTAGFAYV GGACVVNKRL EKVNSVAIIE DTGGFSGIIV AAHEVGHLLG 60
61 AVHDGSPPPS YLGGPGAQRC RWEDGYIMSD LRHTERGFRW SACTVQSFHH FLNGDTATCL 120
121 HNAPHEDSAL GRSLPGTLLS LDAQCRRDRG TYACFKDERV CAQLFCFDAQ TGYCVAYRPA 180
181 AEGSACGNGY HCLDGRCTPL PSNIIPDYGH NYRLVYNVTS SSSSTSNGAK QQPPSNKDEN 240
241 QRQQQQQQQA QQQLQDGLPD EENEATAGIQ SNEAIERQKR KFPTTPTAAT SAAQKSATPA 300
301 TPATSATSAR PTPTT
|
| Detection Method: |  |
| Confidence: | 32.69897 |
| Match: | 2eroA |
| Description: | No description for 2eroA was found. |
|
Region A: Residues: [316-390] |
1 11 21 31 41 51
| | | | | |
1 AKPITTSSFL DAYFKKLQAL HDAGSASSST TTTTTTSVSS SVSSATSSKQ QHPQQQQQQQ 60
61 VQQIADGSHF LKRTP
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [391-476] |
1 11 21 31 41 51
| | | | | |
1 HRSSLKAYKT SSSSSNNSSS QTQQQQQQQQ QQYATNYIGD TTNNQPAVLD NSGSASSTTE 60
61 TAKKPKIKTQ KLIRRTRVMQ TQTQTI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
