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View Structure Prediction Details

Protein: FNRR1_ARATH
Organism: Arabidopsis thaliana
Length: 378 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FNRR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|22530948 - gi|22530948|gb|AAM96978.1| ferredoxin--NADP+ reductase-like protein [Arabidopsis thaliana]
307.0 [0..1] [378..1]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSTTPSQM SVALPTRIDG SSRSMIKVQS ISFTDKSWGP PLLRLDSKSR SLGVKKRSTI  60
   61 CMSLQQSSKS KVLVTPLELE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 1jq4A
Description: Methane monooxygenase reductase N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [81-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPKETPLNLF RPKEPYTATI VSVERIVGPQ APGETCHIVI DHDGNVPYWE GQSYGVIPPG  60
   61 ENPKKPGAPH NVRLYSIAST RYGDSFDGKT ASLCVRRAIY YDPETGKEDP SKAGVCSNFL 120
  121 CNAKPGDKVK ITGPSGKVML LPEDDPKATH IMIATGTGVA PYRGYLRRMF MENVPNFKFD 180
  181 GLAWLFLGVA NSDSLLYDEE FAGYRKDYPE NFRYDKALSR EEKNKKGGKM YVQDKIEEYS 240
  241 DEIFKLLDNG AHIYFCGLKG MMPGIQDTLK RVAEERGESW EQKLTQLRKN KQWHVEVY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.0
Match: 1jb9A
Description: Ferredoxin reductase (flavodoxin reductase) N-terminal domain; Ferredoxin reductase (flavodoxin reductase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.923682288946602 bayes_pls_golite062009
oxidoreductase activity 0.6192827046908 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle