| Protein: | EF105_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 221 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EF105_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
242.0 | [0..1] | [221..1] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MASSHQQQQE QDQSALDLIT QHLLTDFPSL DTFASTIHHC TTSTLSQRKP PLATIAVPTT 60
61 APVVQENDQR HYRGVRRRPW GKYAAEIRDP NKKGVRVWLG TFDTAMEAAR GYDKAAFKLR 120
121 GSKAILNFPL EAGKHEDLGD NKKTISL
|
| Detection Method: |  |
| Confidence: | 24.522879 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [148-221] |
1 11 21 31 41 51
| | | | | |
1 KAKRKRQVTE DESQLISRKA VKREEAQVQA DACPLTPSSW KGFWDGADSK DMGIFSVPLL 60
61 SPCPSLGHSQ LVVT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.382 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.357 | a.43.1 | Met repressor-like |
| View | Download | 0.349 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.273 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.271 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
