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View Structure Prediction Details

Protein: gi|15222871, gi|...
Organism: Arabidopsis thaliana
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222871, gi|....

Description E-value Query
Range
Subject
Range
gi|115480359, gi... - gi|115480359|ref|NP_001063773.1| Os09g0534200 [Oryza sativa (japonica cultivar-group)], gi|113632006...
362.0 [0..12] [272..1]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAATRPIHA VTTWVRRQPP KVKGFLGVVS AMTALVLLRV IVHDHDNLFV AAEAVHSLGI  60
   61 SVLIYKLTKE RTCAGLSLKS QELTALFLAV RLYCSFVMEF DIHTLLDSAT LVTTLFVIYM 120
  121 IRFKLKASYM DDKDNFAIYY VVIPCVVLSV LIHPSTHHHI INKISWAFCV YLEAVSVLPQ 180
  181 LRVMQNTKIV EPFTAHYVFA LGIARFLSCA 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [211-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HWVLQVLDTR GRLLTALGYG FWPIMVLLSE IVQTFILADF CYYYVKSLMG GQLVLRLPSG  60
   61 VV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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