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View Structure Prediction Details

Protein: CE37309
Organism: Caenorhabditis elegans
Length: 616 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37309.

Description E-value Query
Range
Subject
Range
gi|109494718 - gi|109494718|ref|XP_001065003.1| PREDICTED: similar to Proline oxidase, mitochondrial precursor (Pro...
547.0 [0..4] [613..2]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAALIGLNF PLQRRFLSGV LTTTSSAKRC YSGDTGKPYD CTSAEHKKEL EECYNRLDLS  60
   61 FENTKEAFKS KSNTELVRAL VVLRLC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-616]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIQTLVNQNQ IILNTMRRVL GKNLFKKTLK NTFFGHFVAG ETEEEVRHVV EKLRNYGVKS  60
   61 ILDYSVEADI TSQEATDKTV KGTSVATVKP AAMTPVVDAK TLETTRERYT VHEEFGDRRQ 120
  121 GVSSARTYFY EGEEQCDKNR DIFKDSINAV ASATKNEGFV AVKITALGRP QLLLKLSEAI 180
  181 VQTQNFFKAL TGGMSLQEGR LTSQEFYKRL GELGVKTDTE SVKKFFDEVD FDSDGIVDLH 240
  241 GWNHILDDHV KLGQLFQVLN IKTGSLEPLI QNLSNEEEQE FRNMVRRTLD VAEYAIEKGV 300
  301 RIMVDAEQTY LQPAISKITI EMMKKYNKGR GNIFNTYQAY LKGTLQNMEA DMQVARREGW 360
  361 HFGAKLVRGA YMEQERARAK AIGYEDPIND NFEATSKMYE SCLTRIADEV HRRGKTNVSV 420
  421 MVASHNEDTV RFALNLMKEK CISPSERVMC MAQLYGMCDQ VSFSLGQAGF SVYKYLPYGP 480
  481 VEEVLPYLSR RALENGSVLK KANKERDLLW KELKRRISSG EFKARSSSSS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 127.0
Match: 1k87A
Description: N-terminal domain of bifunctional PutA protein; Proline dehydrohenase domain of bifunctional PutA protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on the CH-NH group of donors 1.81392112637925 bayes_pls_golite062009
protein binding 1.38007868564575 bayes_pls_golite062009
binding 1.32681091506724 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 0.60496990558925 bayes_pls_golite062009
oxidoreductase activity 0.5597664623491 bayes_pls_golite062009
catalytic activity 0.23115310247392 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle