| Protein: | vha-17 |
| Organism: | Caenorhabditis elegans |
| Length: | 86 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vha-17.
| Description | E-value | Query Range |
Subject Range |
|
|
124.0 | [0..2] | [81..35] |
|
|
119.0 | [0..2] | [81..35] |
|
|
119.0 | [0..2] | [81..35] |
|
|
115.0 | [0..2] | [77..35] |
|
|
115.0 | [0..3] | [79..45] |
|
|
110.0 | [0..3] | [79..4] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MGILIPLVSV SAFWAIIGFG GPWIVPKGPN RGIIQLMIIM TAVCCWMFWI MVFLHQLNPL 60
61 IGPQINVKTI RWISEKWGDA PNVINN
|
| Detection Method: |  |
| Confidence: | 39.09691 |
| Match: | PF05493.4 |
| Description: | No description for PF05493.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.781 | N/A | N/A | a.246.1 | Description not found. |
| View | Download | 0.694 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.694 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.680 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.673 | N/A | N/A | a.24.18 | Description not found. |
| View | Download | 0.656 | N/A | N/A | a.252.1 | Description not found. |
| View | Download | 0.653 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.626 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.512 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.505 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.495 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.481 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.398 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.385 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
