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View Structure Prediction Details

Protein: inx-9
Organism: Caenorhabditis elegans
Length: 382 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-9.

Description E-value Query
Range
Subject
Range
gi|124020689 - gi|124020689|gb|ABM88790.1| innexin 2 [Bombyx mandarina]
gi|112984532, gi... - gi|112984532|ref|NP_001037203.1| innexin 2 [Bombyx mori], gi|110611088|gb|AAR97567.2| innexin 2 [Bom...
387.0 [0..3] [363..1]

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Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSVPFLTSL TSHLGITAID DASDTLSCLI TAFLFIIAAI LTSAQSYVGS AMECWLPQTY  60
   61 SGAWEEFAEN YCFLKDTYFY PRQQSMTDIP MYHKERHRLT YYQWSSMYLA VAGIAFMIPK 120
  121 FIWRLSQS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [129-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTDMPLIYFC DTANEIKIET TEKRSSKVKE MARFMRSKIT TVHTPSIFSC IRMYSVYSIV  60
   61 KMLYLIIAIA QFVILAIFLD QEKDMFWGWT LFMNLLNGIT WETTGLFPRV TFCDFEIRET 120
  121 AGNNRAETVE CLIGINVFNE KIFLFLWFWL LFLIFSTLVA HIYNATHIAK PYIINSLLHS 180
  181 IRDHGIVDQK ELFKEFGEKY LTMDGKIILS FVKAQSDLVA SEVAVEMYND FLEVRDQRIY 240
  241 IISHEFNDIQ KTRN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle