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View Structure Prediction Details

Protein: CE37421
Organism: Caenorhabditis elegans
Length: 269 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37421.

Description E-value Query
Range
Subject
Range
gi|109113499 - gi|109113499|ref|XP_001092786.1| PREDICTED: similar to ATP synthase mitochondrial F1 complex assembl...
353.0 [0..2] [267..26]

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Predicted Domain #1
Region A:
Residues: [1-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNLGRVAR RFAAAQASAL TKPKKFYKEV SVINETDEST GNQIHKVLLD HRVLKTQGGQ  60
   61 VLKLDSYPLA LAIAEEWSSQ DEFLQLGQMR LTGLAFTAQD NPLEQTADTI SQKILDYVEG 120
  121 DTVLFFNTES SKLHRYQEEK WAPLIKNLNN DLGIKVRPSE NILDCDVASE NDKEKIDRWI 180
  181 RQHNFPALVG LQYATESVKS FVIAYNAIRH HIDPDTAIDA ATLEQRTQAE TWGNVEWAHG 240
  241 IEREELMTRL SAACLFVYFN SNNFTSKTV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.045757
Match: 2r6iA
Description: No description for 2r6iA was found.

Predicted functions:

Term Confidence Notes
binding 2.14957672468792 bayes_pls_golite062009
protein binding 1.2388395457113 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle