| Protein: | VSP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 270 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VSP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..1] | [270..1] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MKILSLSLLL LLAATVSHVQ SSASVPGLIE LLESNTIFGN EAELLEKEGL SINYPNCRSW 60
61 HLGVETSNII NFDTVPANCK AYVEDYLI
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.923 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.668 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.630 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.544 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.527 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
|
Region A: Residues: [89-270] |
1 11 21 31 41 51
| | | | | |
1 TSKQYQYDSK TVNKEAYFYA KGLALKNDTV NVWIFDLDDT LLSSIPYYAK YGYGTENTAP 60
61 GAYWSWLESG ESTPGLPETL HLYENLLELG IEPIIISDRW KKLSEVTVEN LKAVGVTKWK 120
121 HLILKPNGSK LTQVVYKSKV RNSLVKKGYN IVGNIGDQWA DLVEDTPGRV FKLPNPLYYV 180
181 PS
|
| Detection Method: | |
| Confidence: | 38.522879 |
| Match: | 2i33A |
| Description: | No description for 2i33A was found. |
