| Protein: | gi|225898104, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 463 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|225898104, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
373.0 | [0..1] | [463..1] |
|
|
268.0 | [0..9] | [460..217] |
|
|
267.0 | [0..9] | [460..231] |
|
|
251.0 | [0..16] | [426..185] |
|
|
247.0 | [0..35] | [462..187] |
|
|
247.0 | [0..8] | [456..206] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MAEVGKVLAS DMELDHSNET KAVDDVVATT DKAEVIPVAV TRTETVVESL ESTDCKELEK 60
61 LVPHTVASQS EVDVA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [76-167] |
1 11 21 31 41 51
| | | | | |
1 SPVSEKAPKV SESSGALSLQ SGSEGNSPFI REKVMEDGYN WRKYGQKLVK GNEFVRSYYR 60
61 CTHPNCKAKK QLERSAGGQV VDTVYFGEHD HP
|
| Detection Method: | |
| Confidence: | 4.92 |
| Match: | 1wj2A |
| Description: | Solution Structure of the C-terminal WRKY Domain of AtWRKY4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [168-247] |
1 11 21 31 41 51
| | | | | |
1 KPLAGAVPIN QDKRSDVFTA VSKEKTSGSS VQTLRQTEPP KIHGGLHVSV IPPADDVKTD 60
61 ISQSSRITGD NTHKDYNSPT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.431 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.374 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.370 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.370 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.370 | a.64.1 | Saposin |
| View | Download | 0.360 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.360 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.353 | a.46.1 | Methionine synthase domain |
| View | Download | 0.337 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.330 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
|
Region A: Residues: [248-343] |
1 11 21 31 41 51
| | | | | |
1 AKRRKKGGNI ELSPVERSTN DSRIVVHTQT LFDIVNDGYR WRKYGQKSVK GSPYPRSYYR 60
61 CSSPGCPVKK HVERSSHDTK LLITTYEGKH DHDMPP
|
| Detection Method: | |
| Confidence: | 25.045757 |
| Match: | 2aydA |
| Description: | No description for 2aydA was found. |
|
Region A: Residues: [344-463] |
1 11 21 31 41 51
| | | | | |
1 GRVVTHNNML DSEVDDKEGD ANKTPQSSTL QSITKDQHVE DHLRKKTKTN GFEKSLDQGP 60
61 VLDEKLKEEI KERSDANKDH AANHAKPEAK SDDKTTVCQE KAVGTLESEE QKPKTEPAQS 120
121
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
