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View Structure Prediction Details

Protein: gi|28827734, gi|...
Organism: Arabidopsis thaliana
Length: 348 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28827734, gi|....

Description E-value Query
Range
Subject
Range
gi|21593366 - gi|21593366|gb|AAM65315.1| ethylene-forming-enzyme-like dioxygenase-like protein [Arabidopsis thalia...
340.0 [0..1] [348..1]

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Predicted Domain #1
Region A:
Residues: [1-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKPKFKTVQ EVVAAGEGLP ERYLHAPTGD GEVQPLNAAV PEMDIPAIDL NLLLSSSEAG  60
   61 QQELSKLHSA LSTWGVVQVM NHGITKAFLD KIYKLTKEFF ALPTEEKQKC AREIDSIQGY 120
  121 GNDMILWDDQ VLDWIDRLYI TTYPEDQRQL NFWPEVPLGF RETLHEYTMK QRIVIEQFFK 180
  181 AMARSLELEE NSFLDMYGES ATLDTRFNMY PPCPSPDKVI GVKPHADGSA ITLLLPDKDV 240
  241 GGLQFQKDGK WYKAPIVPDT ILINVGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCI 300
  301 PGADKEIQPV NELVSEARPR LYKTVKKYVE LYFKYYQQGR RPIEAALI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.522879
Match: 2brtA
Description: No description for 2brtA was found.

Predicted functions:

Term Confidence Notes
1-aminocyclopropane-1-carboxylate oxidase activity 2.55319769490634 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 1.82471557626796 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors 1.45256699472411 bayes_pls_golite062009
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.881222146308311 bayes_pls_golite062009
oxidoreductase activity 0.748070809709687 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle