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View Structure Prediction Details

Protein: gi|18408744, gi|...
Organism: Arabidopsis thaliana
Length: 140 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18408744, gi|....

Description E-value Query
Range
Subject
Range
gi|92899055 - gi|92899055|gb|ABE94521.1| Heavy metal transport/detoxification protein [Medicago truncatula]
127.0 [0..4] [140..30]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMTVEIRVP NLDCEGCASK LRKTLLKLKG VEEVEVEMET QKVTARGYRL EEKKVLKAVR  60
   61 RAGKAAELWP YRLGNSHFAS FYKYPSYVTN HYYSDAHRTD PTGGVHTFFH TPADYSVAVA 120
  121 GDEIAASMFS DDNPHACTIM 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.522879
Match: 1kqkA
Description: Potential copper-translocating P-type ATPase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.246147507070597 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle