| Protein: | gi|20857250, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 250 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20857250, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
271.0 | [0..1] | [250..27] |
|
|
230.0 | [0..2] | [242..36] |
|
|
222.0 | [0..3] | [242..31] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MVYGKRSSVE VIGFLNIYRH DPWDLPGLSR IGEREWYFFV PRERKHGNGG RPSRTTEKGY 60
61 WKATGSDRKI ISLSEPKRVI GLKKTLVFYR GRAPGGSKTD WVMNEFRMPD NCSLPKDVVL 120
121 CKIYRKATSL KVLE
|
| Detection Method: |  |
| Confidence: | 49.154902 |
| Match: | 1ut4A |
| Description: | Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [135-250] |
1 11 21 31 41 51
| | | | | |
1 QRAEMEAKMN QTCPNSPLSS SETISFVGKE ENMMTSFRAP QVIAMEEANK IQMHQENAKT 60
61 EEKQREAETK EPSSSLKLPF GSLPELQLPK PGVEWDQLLS ISPWLQNLTP IVNIYW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.488 | a.24.3 | Cytochromes |
| View | Download | 0.324 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.296 | f.51.1 | Description not found. |
| View | Download | 0.238 | a.1.1 | Globin-like |
| View | Download | 0.237 | a.47.2 | t-snare proteins |
| View | Download | 0.237 | a.47.2 | t-snare proteins |
| View | Download | 0.237 | a.24.3 | Cytochromes |
| View | Download | 0.237 | a.24.3 | Cytochromes |
| View | Download | 0.219 | a.24.18 | Description not found. |
