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View Structure Prediction Details

Protein: FPF1_ARATH
Organism: Arabidopsis thaliana
Length: 110 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FPF1_ARATH.

Description E-value Query
Range
Subject
Range
FPF1_SINAL - Flowering-promoting factor 1 OS=Sinapis alba GN=FPF1 PE=2 SV=1
211.0 [0..1] [110..1]
gi|11357356, gi|... - gi|7671439|emb|CAB89379.1| putative protein [Arabidopsis thaliana], pir||T49975 hypothetical protein...
198.0 [0..1] [105..1]
gi|125525248 - gi|125525248|gb|EAY73362.1| hypothetical protein OsI_01240 [Oryza sativa Indica Group]
FLP1_ORYSJ - Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica GN=RAA1 PE=1 SV=1
184.0 [0..1] [109..1]
gi|40949983 - gi|40949983|gb|AAR97604.1| flowering promoting factor-like 1 [Nicotiana tabacum]
178.0 [0..1] [108..1]
gi|125547578, gi... - gi|125547578|gb|EAY93400.1| hypothetical protein OsI_15197 [Oryza sativa Indica Group], gi|116308921...
165.0 [0..1] [109..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGVWVFKNG VIRLVENPNQ SGSDTQNRRK VMVYLPTGEV VSSYSTLEQI LQSLGWERYF  60
   61 GGGDTDLLQF HKRSSIDLIS LPRDFTKFNS VYMYDIVVKN PNYFHVRDSH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.538 c.46.1 Rhodanese/Cell cycle control phosphatase
View Download 0.526 c.78.2 Aspartate/glutamate racemase
View Download 0.526 c.78.2 Aspartate/glutamate racemase
View Download 0.515 c.26.1 Nucleotidylyl transferase
View Download 0.515 c.26.1 Nucleotidylyl transferase
View Download 0.501 c.46.1 Rhodanese/Cell cycle control phosphatase
View Download 0.501 c.23.3 Hypothetical protein MTH538
View Download 0.501 c.23.3 Hypothetical protein MTH538
View Download 0.489 c.2.1 NAD(P)-binding Rossmann-fold domains
View Download 0.365 c.47.1 Thioredoxin-like
View Download 0.241 d.110.3 PYP-like sensor domain (PAS domain)
View Download 0.218 c.26.2 Adenine nucleotide alpha hydrolases-like
View Download 0.210 d.38.1 Thioesterase/thiol ester dehydrase-isomerase


YRC Informatics Platform - Version 3.0
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