YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SPO11_ARATH
Organism: Arabidopsis thaliana
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPO11_ARATH.

Description E-value Query
Range
Subject
Range
gi|13383478 - gi|13383478|gb|AAK21002.1| AtSPO11-1 [Arabidopsis thaliana]
486.0 [0..1] [362..1]

Back

Predicted Domain #1
Region A:
Residues: [1-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGKFAISES TNLLQRIKDF TQSVVVDLAE GRSPKISINQ FRNYCMNPEA DCLCSSDKPK  60
   61 GQEIFTLKKE PQTYRIDMLL RVLLIVQQLL QENRHASKRD IYYMHPSAFK AQSIVDRAIG 120
  121 DICILFQCSR YNLNVVSVGN GLVMGWLKFR EAGRKFDCLN SLNTAYPVPV LVEEVEDIVS 180
  181 LAEYILVVEK ETVFQRLAND MFCKTNRCIV ITGRGYPDVS TRRFLRLLME KLHLPVHCLV 240
  241 DCDPYGFEIL ATYRFGSMQM AYDIESLRAP DMKWLGAFPS DSEVYSVPKQ CLLPLTEEDK 300
  301 KRTEAMLLRC YLKREMPQWR LELETMLKRG VKFEIEALSV HSLSFLSEVY IPSKIRREVS 360
  361 SP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.522879
Match: 2q2eA
Description: No description for 2q2eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle