| Protein: | ATB17_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 275 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATB17_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
126.0 | [0..18] | [195..25] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MIKLLFTYIC TYTYKLYALY HMDYACVCMY KYKGIVTLQV CLFYIKLRVF LSNFTFSSSI 60
61 LALKNPNNSL IKIMAILPEN SSNLDLTISV PGFSSSPLSD EGSGGGRDQL RLDMNRLPSS 120
121 EDGDDEEFSH DDGSAPPRKK LRLTREQSRL LEDSFRQNHT LNPKQKEVLA KHLMLRPRQI 180
181 EVWFQNRRAR SKLKQTEMEC EYLKRWFGS
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 1au7A |
| Description: | Pit-1 POU homeodomain; Pit-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.971797124886045 | bayes_pls_golite062009 |
| nucleic acid binding | 0.74904610690468 | bayes_pls_golite062009 |
| DNA binding | 0.73457854282882 | bayes_pls_golite062009 |
|
Region A: Residues: [210-275] |
1 11 21 31 41 51
| | | | | |
1 LTEENHRLHR EVEELRAMKV GPTTVNSASS LTMCPRCERV TPAASPSRAV VPVPAKKTFP 60
61 PQERDR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
