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View Structure Prediction Details

Protein: BG4_ARATH
Organism: Arabidopsis thaliana
Length: 345 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BG4_ARATH.

Description E-value Query
Range
Subject
Range
gi|16903144 - gi|16903144|gb|AAL30426.1|AF435089_1 beta-1,3-glucanase [Prunus persica]
420.0 [0..1] [344..1]

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Predicted Domain #1
Region A:
Residues: [1-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYSPKKLFL FFLSCIVLYV NSNNSGFVTA ANSIGLNYGL LGDNLPSPSN VINLYKSIGI  60
   61 SRIRIFDPNT EVLNALRGHR DIEVTVGVKD QDLAALAASE EAVKGWFAAN IESYLADVNI 120
  121 TFITVGNEVI PGPIGPQVLP VMQSLTNLVK SRNLPISIST VVAMSNLEQS YPPSAGMFTS 180
  181 QAREQLVPVL KLLSQTSTPI LVNIYPYFAY ASDPANIRLD YASFNTKSIV VQDGSLGYSN 240
  241 MFDAIFDAFV WAMEKEGVKN LPMVVSETGW PSAGNGNFTT PAIASTYNRN FVKHIASGKG 300
  301 TPKRPNKSMN GFLFATFNEN QKPAGTEQNF GLYNPSDMKP IYKLF

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Detection Method: PSI-BLAST
Confidence: 107.0
Match: 2cygA
Description: Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.32563207632796 bayes_pls_golite062009
hydrolase activity 0.85514037342026 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 0.80912338090552 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 0.41375210927547 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle