| Protein: | AP2A1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1012 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP2A1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
742.0 | [0..1] | [1012..1] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MTGMRGLSVF ISDVRNCQNK EAERLRVDKE LGNIRTCFKN EKVLTPYKKK KYVWKMLYIH 60
61 MLGYDV
|
| Detection Method: |  |
| Confidence: | 1.4 |
| Match: | 1w63A |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [67-655] |
1 11 21 31 41 51
| | | | | |
1 DFGHMEAVSL ISAPKYPEKQ VGYIVTSCLL NENHDFLKLA INTVRNDIIG RNETFQCLAL 60
61 TLVGNIGGRD FAESLAPDVQ KLLISSSCRP LVRKKAALCL LRLFRKNPDA VNVDGWADRM 120
121 AQLLDERDLG VLTSSTSLLV ALVSNNHEAY SSCLPKCVKI LERLARNQDV PQEYTYYGIP 180
181 SPWLQVKAMR ALQYFPTIED PSTRKALFEV LQRILMGTDV VKNVNKNNAS HAVLFEALSL 240
241 VMHLDAEKEM MSQCVALLGK FISVREPNIR YLGLENMTRM LMVTDVQDII KKHQSQIITS 300
301 LKDPDISIRR RALDLLYGMC DVSNAKDIVE ELLQYLSTAE FSMREELSLK AAILAEKFAP 360
361 DLSWYVDVIL QLIDKAGDFV SDDIWFRVVQ FVTNNEDLQP YAASKAREYL DKIAIHETMV 420
421 KVSAYILGEY GHLLARQPGC SASELFSILH EKLPTISTPT IPILLSTYAK LLMHAQPPDP 480
481 ELQKKVWAVF KKYESCIDVE IQQRAVEYFE LSKKGPAFMD VLAEMPKFPE RQSSLIKKAE 540
541 NVEDTADQSA IKLRAQQQPS NAMVLADQQP VNGAPPPLKV PILSGSTDP
|
| Detection Method: | |
| Confidence: | 49.221849 |
| Match: | 2iaeA |
| Description: | No description for 2iaeA was found. |
|
Region A: Residues: [656-727] |
1 11 21 31 41 51
| | | | | |
1 ESVARSLSHP NGTLSNIDPQ TPSPDLLSDL LGPLAIEAPP GAVSNEQHGP VGAEGVPDEV 60
61 DGSAIVPVEE QT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [728-1012] |
1 11 21 31 41 51
| | | | | |
1 NTVELIGNIA ERFHALCLKD SGVLYEDPHI QIGIKAEWRG HHGRLVLFMG NKNTSPLTSV 60
61 QALILPPAHL RLDLSPVPDT IPPRAQVQSP LEVMNIRPSR DVAVLDFSYK FGANVVSAKL 120
121 RIPATLNKFL QPLQLTSEEF FPQWRAISGP PLKLQEVVRG VRPLALPEMA NLFNSFHVTI 180
181 CPGLDPNPNN LVASTTFYSE STGAILCLAR IETDPADRTQ LRMTVGTGDP TLTFELKEFI 240
241 KEQLITVPMG SRALVPAAGP APPVAQPPSP AALADDPGAM LAGLL
|
| Detection Method: | |
| Confidence: | 81.69897 |
| Match: | 1w80A |
| Description: | Crystal structure of the alpha-adaptin appendage domain, from the AP2 adaptor complex, bound to 2 peptides from Synaptojanin170 |
Matching Structure (courtesy of the PDB): |
|
