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View Structure Prediction Details

Protein: CAX2_ARATH
Organism: Arabidopsis thaliana
Length: 441 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAX2_ARATH.

Description E-value Query
Range
Subject
Range
gi|9294538 - gi|9294538|dbj|BAB02801.1| calcium/proton exchanger [Arabidopsis thaliana]
328.0 [0..1] [439..1]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCCKVPVLI EAQVEMVSAN ELENKSLFRQ EEDATQTKEA SLMEQGSLST SFPQHTPKAP  60
   61 KNSVLNSIKI VIFCNKLNLL LPFGPLAILV HYMID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKGWVFLLTL VGITPLAERL GYATEQLACY TGPTVGGLLN ATFGNVTELI ISIFALKNGM  60
   61 IRVVQLTLLG SILSNMLLVL GCAFFCGGLV FYQKDQVFDK GIATVNSGLL LMAVMGILFP 120
  121 AVLHYTHSEV HAGSSELALS RFSSCIMLIA YAAYLFFQLK SQSNSYSP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.468521
Match: PF01699.15
Description: No description for PF01699.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [264-441]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDEESNQNEE TSAEDEDPEI SKWEAIIWLS ILTAWVSLLS GYLVDAIEGA SVSWNIPIAF  60
   61 ISTILLPIVG NAAEHAGAIM FAMKDKLDLS LGVAIGSSIQ ISMFAVPFCV VIGWMMGQQM 120
  121 DLNFQLFETA MLFITVIVVA FFLQEGSSNY FKGLMLILCY LIVAASFFVH EDPHQDGI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.39794
Match: PF01699.15
Description: No description for PF01699.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle