| Protein: | gi|30690286, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 739 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30690286, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
371.0 | [0..14] | [739..14] |
|
|
356.0 | [0..14] | [739..14] |
|
|
353.0 | [0..1] | [737..1] |
|
|
350.0 | [0..14] | [738..14] |
|
|
346.0 | [0..1] | [732..1] |
|
|
338.0 | [0..4] | [738..5] |
|
Region A: Residues: [1-439] |
1 11 21 31 41 51
| | | | | |
1 MSGAVLVAIA AAVGNLLQGW DNATIAGAVL YIKKEFNLES NPSVEGLIVA MSLIGATLIT 60
61 TCSGGVADWL GRRPMLILSS ILYFVGSLVM LWSPNVYVLL LGRLLDGFGV GLVVTLVPIY 120
121 ISETAPPEIR GLLNTLPQFT GSGGMFLSYC MVFGMSLMPS PSWRLMLGVL FIPSLVFFFL 180
181 TVFFLPESPR WLVSKGRMLE AKRVLQRLRG REDVSGEMAL LVEGLGIGGE TTIEEYIIGP 240
241 ADEVTDDHDI AVDKDQIKLY GAEEGLSWVA RPVKGGSTMS VLSRHGSTMS RRQGSLIDPL 300
301 VTLFGSVHEK MPDTGSMRSA LFPHFGSMFS VGGNQPRHED WDEENLVGEG EDYPSDHGDD 360
361 SEDDLHSPLI SRQTTSMEKD MPHTAHGTLS TFRHGSQVQG AQGEGAGSMG IGGGWQVAWK 420
421 WTEREDESGQ KEGGFKRIY
|
| Detection Method: |  |
| Confidence: | 13.522879 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [440-557] |
1 11 21 31 41 51
| | | | | |
1 LHQEGFPGSR RGSIVSLPGG DGTGEADFVQ ASALVSQPAL YSKDLLKEHT IGPAMVHPSE 60
61 TTKGSIWHDL HDPGVKRALV VGVGLQILQQ FSGINGVLYY TPQILEQAGV GILLSNMG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.599 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.585 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.544 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.504 | a.29.6 | Description not found. |
| View | Download | 0.489 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.428 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.337 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.332 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
|
Region A: Residues: [558-739] |
1 11 21 31 41 51
| | | | | |
1 ISSSSASLLI SALTTFVMLP AIAVAMRLMD LSGRRTLLLT TIPILIASLL VLVISNLVHM 60
61 NSIVHAVLST VSVVLYFCFF VMGFGPAPNI LCSEIFPTRV RGICIAICAL TFWICDIIVT 120
121 YSLPVLLKSI GLAGVFGMYA IVCCISWVFV FIKVPETKGM PLEVITEFFS VGARQAEAAK 180
181 NE
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1pv6A |
| Description: | Crystal structure of lactose permease |
Matching Structure (courtesy of the PDB): |
|
