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View Structure Prediction Details

Protein: gi|15240395, gi|...
Organism: Arabidopsis thaliana
Length: 121 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240395, gi|....

Description E-value Query
Range
Subject
Range
gi|33342038 - gi|33342038|dbj|BAC80253.1| MADS-box transcription factor [Houttuynia cordata]
133.0 [0..1] [118..28]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKKALELST LCDIEVCVIL YSRDGELIKT WPEDQSKVRD MAERFSKLHE RERRKKRTNL  60
   61 SLFLRKKILD NSKLSEKVLE MKDSLESGLR VLQDKLLLLQ PEKNQTELGQ IPVINNGQNH 120
  121 W

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.522879
Match: 1n6jA
Description: Structural basis of sequence-specific recruitment of histone deacetylases by Myocyte Enhancer Factor-2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.0368771990474 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle