| Protein: | CCSDS_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 578 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCSDS_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
420.0 | [0..6] | [570..1] |
|
|
289.0 | [0..161] | [575..8] |
|
|
288.0 | [0..120] | [578..1] |
|
|
287.0 | [0..176] | [577..26] |
|
|
287.0 | [0..161] | [576..8] |
|
|
282.0 | [0..116] | [577..52] |
|
|
281.0 | [0..176] | [577..24] |
|
|
280.0 | [0..203] | [577..9] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MKEIAMRNSK RKPEPTPFAG KKLRSTRLRR KRAQISPVLV QSPLWSKQIG VSAASVDSCS 60
61 DLLADDNVSC GSSRVEKSSN PKKTLIEEVE VSKPGYNVKE TIGDSKFRRI TRSYSKLHKE 120
121 KEGDEIEVSE SSCV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.258 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.245 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.221 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.220 | b.60.1 | Lipocalins |
| View | Download | 0.220 | b.60.1 | Lipocalins |
| View | Download | 0.210 | a.24.19 | Description not found. |
| View | Download | 0.202 | c.10.2 | L domain-like |
|
Region A: Residues: [135-342] |
1 11 21 31 41 51
| | | | | |
1 DSNSGAGLRR LNVKGNKIND NDEISFSRSD VTFAGHVSNS RSLNFESENK ESDVVSVISG 60
61 VEYCSKFGSV TGGADNEEIE ISKPSSFVEA DSSLGSAKEL KPELEIVGCV SDLACSEKFS 120
121 EEVSDSLDDE SSEQRSEIYS QYSDFDYSDY TPSIFFDSGS EFSEKSSSDS PISHSRSLYL 180
181 QFKEQFCRST IPNDFGSSCE EEIHSELL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [343-578] |
1 11 21 31 41 51
| | | | | |
1 RFDDEEVEES YLRLRERERS HAYMRDCAKA YCSRMDNTGL IPRLRSIMVQ WIVKQCSDMG 60
61 LQQETLFLGV GLLDRFLSKG SFKSERTLIL VGIASLTLAT RIEENQPYNS IRKRNFTIQN 120
121 LRYSRHEVVA MEWLVQEVLN FKCFTPTIFN FLWFYLKAAR ANPEVERKAK SLAVTSLSDQ 180
181 TQLCFWPSTV AAALVVLACI EHNKISAYQR VIKVHVRTTD NELPECVKSL DWLLGQ
|
| Detection Method: | |
| Confidence: | 61.0 |
| Match: | 2jgzB |
| Description: | No description for 2jgzB was found. |
