| Protein: | POLH_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 672 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POLH_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
511.0 | [0..1] | [672..1] |
|
|
423.0 | [0..11] | [670..6] |
|
|
423.0 | [0..11] | [670..6] |
|
Region A: Residues: [1-480] |
1 11 21 31 41 51
| | | | | |
1 MPVARPEASD ARVIAHVDMD CFYVQVEQRK QPELRGLPSA VVQYNEWQGG GLIAVSYEAR 60
61 KCGVKRSMRG DEAKAACPQI QLVQVPVARG KADLNLYRSA GSEVVSILAK SGKCERASID 120
121 EVYLDLTDAA ESMLADAPPE SLELIDEEVL KSHILGMNRE DGDDFKESVR NWICREDADR 180
181 RDKLLSCGII IVAELRKQVL KETEFTCSAG IAHNKMLAKL ASGMNKPAQQ TVVPYAAVQE 240
241 LLSSLPIKKM KQLGGKLGTS LQTDLGVDTV GDLLQFSETK LQEHYGVNTG TWLWNIARGI 300
301 SGEEVQGRLL PKSHGSGKTF PGPRALKSLS TVQHWLNQLS EELSERLGSD LEQNKRIAST 360
361 LTLHASAFRS KDSDSHKKFP SKSCPMRYGV TKIQEDAFNL FQAALREYMG SFGIKPQGNK 420
421 LETWRITGLS VSASKIVDIP SGTSSIMRYF QSQPTVPSRS ADGCVQGNVA MTASASEGCS 480
481
|
| Detection Method: |  |
| Confidence: | 89.0 |
| Match: | 2oh2A |
| Description: | No description for 2oh2A was found. |
|
Region A: Residues: [481-535] |
1 11 21 31 41 51
| | | | | |
1 EQRSTETQAA MPEVDTGVTY TLPNFENQDK DIDLVSEKDV VSCPSNEATD VSTQS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.867 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.764 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.764 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.744 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.737 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.734 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.734 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.731 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.685 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.518 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.424 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.410 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.307 | b.40.4 | Nucleic acid-binding proteins |
|
Region A: Residues: [536-672] |
1 11 21 31 41 51
| | | | | |
1 ESNKGTQTKK IGRKMNNSKE KNRGMPSIVD IFKNYNATPP SKQETQEDST VSSASKRAKL 60
61 SSSSHNSQVN QEVEESRETD WGYKTDEIDQ SVFDELPVEI QRELRSFLRT NKQFNTGKSK 120
121 GDGSTSSIAH YFPPLNR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.333 | N/A | N/A | d.227.1 | OsmC-like |
| View | Download | 0.207 | N/A | N/A | c.120.1 | PIN domain-like |
| View | Download | 0.202 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.202 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
