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View Structure Prediction Details

Protein: BGA12_ARATH
Organism: Arabidopsis thaliana
Length: 728 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BGA12_ARATH.

Description E-value Query
Range
Subject
Range
gi|7488062, gi|4... - pir||T04269 probable beta-galactosidase (EC 3.2.1.23) - Arabidopsis thaliana, gi|7269465|emb|CAB7946...
765.0 [0..1] [728..1]

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Predicted Domain #1
Region A:
Residues: [1-728]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLNFREKAW ILLGILCCSS LICSVKAIVT YDRKAVIING QRRILLSGSI HYPRSTPEMW  60
   61 PDLIQKAKDG GLDVIQTYVF WNGHEPSPGQ YYFEDRYDLV KFIKVVQQAG LYVHLRIGPY 120
  121 VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK AAMQKFTEKI VRMMKEEKLF ETQGGPIILS 180
  181 QIENEYGPIE WEIGAPGKAY TKWVAEMAQG LSTGVPWIMC KQDDAPNSII NTCNGFYCEN 240
  241 FKPNSDNKPK MWTENWTGWF TEFGGAVPYR PAEDIALSVA RFIQNGGSFI NYYMYHGGTN 300
  301 FDRTAGEFIA TSYDYDAPLD EYGLPREPKY SHLKRLHKVI KLCEPALVSA DPTVTSLGDK 360
  361 QEAHVFKSKS SCAAFLSNYN TSSAARVLFG GSTYDLPPWS VSILPDCKTE YYNTAKVQVR 420
  421 TSSIHMKMVP TNTPFSWGSY NEEIPSANDN GTFSQDGLVE QISITRDKTD YFWYLTDITI 480
  481 SPDEKFLTGE DPLLTIGSAG HALHVFVNGQ LAGTAYGSLE KPKLTFSQKI KLHAGVNKLA 540
  541 LLSTAAGLPN VGVHYETWNT GVLGPVTLNG VNSGTWDMTK WKWSYKIGTK GEALSVHTLA 600
  601 GSSTVEWKEG SLVAKKQPLT WYKSTFDSPT GNEPLALDMN TMGKGQMWIN GQNIGRHWPA 660
  661 YTARGKCERC SYAGTFTEKK CLSNCGEASQ RWYHVPRSWL KPTNNLVIVL EEWGGEPNGI 720
  721 SLVKRTAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.39794
Match: 1tg7A
Description: Native structure of beta-galactosidase from Penicillium sp.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.32563207632796 bayes_pls_golite062009
hydrolase activity 0.85514037342026 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 0.80912338090552 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 0.41375210927547 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle