YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: STR14_ARATH
Organism: Arabidopsis thaliana
Length: 224 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STR14_ARATH.

Description E-value Query
Range
Subject
Range
gi|21553366 - gi|21553366|gb|AAM62459.1| unknown [Arabidopsis thaliana]
171.0 [0..1] [224..1]

Back

Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLTSIATP YPSSSQALRL KSSGNTLFSA GVRSAAMVSG HKTLKIQCTS TKPAKPAAEV  60
   61 DWRQKRELLL EKRVRSVDVK EAQRLQKENN FVILDVRPEA EYKAGHPPGA INVEMYRLIR 120
  121 EWTAWDIARR LGFAFFGIFS GTEENPEFIQ SVEAKLDKEA KIIVACSSAG TMKPTQNLPE 180
  181 GQQSRSLIAA YLLVLNGYKN VFHLEGGIYT WGKEGLPVET IEED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.221849
Match: 1uarA
Description: Crystal structure of Rhodanese from Thermus thermophilus HB8
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.157249563453524 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle