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View Structure Prediction Details

Protein: Y1181_ARATH
Organism: Arabidopsis thaliana
Length: 692 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1181_ARATH.

Description E-value Query
Range
Subject
Range
gi|7239508, gi|2... - gi|7239508|gb|AAF43234.1|AC012654_18 EST gb|AI998820 comes from this gene. [Arabidopsis thaliana], p...
443.0 [0..1] [692..1]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLPSSMPI VSFPANPNLL INPQPSWPSR RGNSAVVVSA ASRDVDSFTS KSGYLFSLSA  60
   61 DEADSLSEYN FPRIDGMYKK KPLILLRRLA QIGTTFSYWF GLRLADEALE RSDQMFKVRA 120
  121 AELRKLLVEL GPAYVKIAQA VSSRPDLIPP IYLDELSLLQ DQITP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.39794
Match: 2uzrA
Description: No description for 2uzrA was found.

Predicted Domain #2
Region A:
Residues: [166-692]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSTEVAFNMI EDELGLPIDE LFSEISPEPV AAASLGQVYQ ARLRRSGKVV AVKVQRPGVR  60
   61 AAIALDTLIL RYIAGLIKKA GRFNSDLEAV VDEWATSLFK EMDYLNEAQN GIKFRKLYGG 120
  121 IKDVLVPKMY TEYSTSKVLV MEWVEGQKLN EVNDLYLVEV GVYCSFNQLL EYGFYHADPH 180
  181 PGNFLRTYDG QLAYLDFGMM GDFRPELRDG FMEACLHLVN RDFKALAKDF VTLGLLPPTA 240
  241 EKSAVTKALT DVFQDAISRG VRNISFGDLL GDLGKTMYRF KFRIPPYFSL VIRSLAVLEG 300
  301 IAIGISPNYK VLGSTYPWIA RKILTDSSPQ LKSSLQNLLY EEGVFRIDRL ESLLSESLRT 360
  361 ETALVQKPVV GTESNIAMKQ MLAFTFTEQG SFVREILLRE FAKGLDAYGL ATLDSFTFSG 420
  421 SGPSSSLTEE DMTNLRTFYR LISLFSGMQK AKSQVKAVSK YGEALTPLDE ASLVMYQLPS 480
  481 AQEMLPILSI LPELPQESQQ RLLQLPGDLV GRLVTRAFAR TIRRIFL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.09691
Match: 2acxA
Description: No description for 2acxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle