| Protein: | RGAP5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 331 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RGAP5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
253.0 | [0..1] | [331..74] |
|
Region A: Residues: [1-234] |
1 11 21 31 41 51
| | | | | |
1 MDIGGPTNIR HVAHVTFDRF DGFLGLPSEF EPDVPRKAPS ASATVFGVST ESMQLSYDSR 60
61 GNCVPVILLL LQSRLYDQGG LQAEGVFRIT GENSEEEFVR EQLNKGIIPD GIDVHCLAGL 120
121 IKAWFRELPR GVLDPLPSEQ VMQCESDEDF VKVVRLLPQT EASLLNWAIN LMADVIQFEH 180
181 VNKMNSRNLA LVFAPNMSQM ADPLTALMYA VQVMKLLKSL TEKTVREREA SSSV
|
| Detection Method: |  |
| Confidence: | 41.69897 |
| Match: | 1ow3A |
| Description: | p50 RhoGAP domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| enzyme regulator activity | 0.68732227880003 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.590837939249671 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.59070509814251 | bayes_pls_golite062009 |
| enzyme activator activity | 0.53004209819211 | bayes_pls_golite062009 |
| GTPase activator activity | 0.528693496432149 | bayes_pls_golite062009 |
| small GTPase regulator activity | 0.10243777232979 | bayes_pls_golite062009 |
| Ras GTPase activator activity | 0.0454578418356197 | bayes_pls_golite062009 |
|
Region A: Residues: [235-331] |
1 11 21 31 41 51
| | | | | |
1 VDRRCSKEAE DGEKEKDNEE EEEDEEEEEE EEDEDEDEEE EGDGVYIIKE EEASEIIKVV 60
61 ADEHKSGSIK SEFEGSSATD SKGDNGVVQP PICSSNP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
