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View Structure Prediction Details

Protein: gi|27754411, gi|...
Organism: Arabidopsis thaliana
Length: 189 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|27754411, gi|....

Description E-value Query
Range
Subject
Range
gi|30692242, gi|... - gi|30692248|ref|NP_680266.2| unknown protein [Arabidopsis thaliana], gi|30692242|ref|NP_851091.1| un...
213.0 [0..1] [189..1]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETKQPLIG LKWEPKLPGL SLDLKTGSTR SKTAESSKSE LVDGLCLPPN DPRKINKMIR  60
   61 KQLKDTTGSN WFDMPAPTMT PELKRDLQLL KLRTVMDPAL HYKKSVSRSK LAEKYFQIGT 120
  121 VIEPAEEFYG RLTKKNRKAT LADELVSDPK TALYRKRKVR EIEEKSRAVT NKKWNKKGNQ 180
  181 SKNTKPRRN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 50.69897
Match: PF08698.2
Description: No description for PF08698.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle