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View Structure Prediction Details

Protein: gi|27754320, gi|...
Organism: Arabidopsis thaliana
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|27754320, gi|....

Description E-value Query
Range
Subject
Range
gi|92891796 - gi|92891796|gb|ABE90955.1| Glycoside hydrolase, family 28 [Medicago truncatula]
332.0 [0..16] [469..25]

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Predicted Domain #1
Region A:
Residues: [1-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPEKNPTTV LSAITRPSWA FLLLVFTVLA ILSLQISSNS FLPLWIPTSQ YDDPVTCSGF  60
   61 FNHDPFPNRI VMSITDFGGV GDGKTSNTAA FRRAVRHLEG FAAEGGAQLN VPEGTWLSGS 120
  121 FNLTSNFTLF LERGALILGS KDLDEWPIIE PLPSYGRGRE RPGGRHISLI HGDNLTNVVI 180
  181 TGENGTIDGQ GKMWWELWWN RTLVHTRGHL IELKNSHNIL ISNLTLLNSP FWTIHPVYCS 240
  241 NVVIRNMTIL APMNAPNTDG IDPDSSTNVC IEDCYIESGD DLVAVKSGWD QYGMAVARPS 300
  301 SNIVIRRISG TTRTCSGVGI GSEMSGGIFN ITVEDIHVWD SAAGLRIKTD KGRGGYISNI 360
  361 TFNNVLLEKV KVPIRFSSGS NDHSDDKWDP KALPRVKGIY ISNVVSLNSR KAPMLLGVEG 420
  421 TSFQDVCLRN VTLLGLPKTE KWKCKDVSGY ASDVFPLSCP QLLQKKGSIA QCSYR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.045757
Match: 2uveA
Description: No description for 2uveA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle