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View Structure Prediction Details

Protein: CLE41_ARATH
Organism: Arabidopsis thaliana
Length: 99 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLE41_ARATH.

Description E-value Query
Range
Subject
Range
CLE44_ARATH - CLAVATA3/ESR (CLE)-related protein 44 OS=Arabidopsis thaliana GN=CLE44 PE=1 SV=1
124.0 [0..1] [99..1]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSNDQTNT KSSHSRTLLL LFIFLSLLLF SSLTIPMTRH QSTSMVAPFK RVLLESSVPA  60
   61 SSTMDLRPKA STRRSRTSRR REFGNDAHEV PSGPNPISN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.449 d.52.3 Prokaryotic type KH domain (KH-domain type II)
View Download 0.416 d.58.12 eEF-1beta-like
View Download 0.328 d.52.4 YhbC-like, N-terminal domain
View Download 0.286 b.107.1 Urease metallochaperone UreE, N-terminal domain
View Download 0.265 d.52.5 Probable GTPase Der, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle