YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|15242049, gi|...
Organism: Arabidopsis thaliana
Length: 205 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242049, gi|....

Description E-value Query
Range
Subject
Range
gi|21553812 - gi|21553812|gb|AAM62905.1| ripening-related protein-like [Arabidopsis thaliana]
200.0 [0..1] [205..1]

Back

Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTQNLFLV AIAFAVIFTA STVHGRHNGA EDIVHSSCEH ASYPSLCVRT LSSYSGPTIT  60
   61 NRRDLAQAAI KISLSHAQSA AKKLAVVRDS VGKKKQEKAA LVDCVEMIGD SVDELSRTLG 120
  121 VLKHLRVSGG SAKEFRWQMS NAQTWASAAL TDDDTCLDGF QGMDDGEIKT EVKQWMTKVA 180
  181 RVTSNALYMV NQLDETRGKP HDVHL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.69897
Match: 1xg2B
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle