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View Structure Prediction Details

Protein: LHTL7_ARATH
Organism: Arabidopsis thaliana
Length: 456 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LHTL7_ARATH.

Description E-value Query
Range
Subject
Range
gi|12597815 - gi|12597815|gb|AAG60126.1|AC073555_10 lysine and histidine specific transporter, putative [Arabidops...
203.0 [0..21] [455..382]

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Predicted Domain #1
Region A:
Residues: [1-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPAPSTDPQ PISGEKNGGD GGRIPVEEWL PITESRKGNV YTATFHLLCS GIGLQVILLP  60
   61 AAFAALGWVW GTIILTVGFV WKLYTTWLLV QLHEAVPGIR ISRYVRLAIA SFGVKLGKLL 120
  121 GIFPVMYLSG GACTILVITG GKSIQQLLQI MSDDNTAPLT SVQCFLVFSC IAMIMSQFPN 180
  181 LNSLFGVSLI GAFMGIAYCT VIWILPVASD SQRTQVSVSY ATMDKSFVHI FNAIGLIALV 240
  241 YRGNNLVLEI QGTLPSDSKN PSCKTMWRAV MISHALVAIC MFPLTFAVYW AYGDKIPATG 300
  301 GPVGNYLKLY TQEHSKRAAC FIHLTFIFSC LCSYPINLMP ACDNIEMVYI TKKKKPASII 360
  361 VRMMLRVFLS LVCFTIAVGF PFLPYLAVLI GAIALLVTFT YPCFMWISIK KPQRKSPMWL 420
  421 FNVLVGCLGA SLSVLLLVAS AMRLAQKGLH ANFFRP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.24
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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