| Protein: | SHH2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 348 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SHH2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
686.0 | [0..1] | [348..1] |
|
|
363.0 | [0..1] | [341..1] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MGRPPSNGGP AFRFILPEVT EMEAILLQHN TAMPGRHILE ALADKFSESP ERKGKVVVQF 60
61 KQIWNWFQNR RYALRARGNK APGKLNVSSM PRMDLPNQMR SVIQPLSVPK T
|
| Detection Method: |  |
| Confidence: | 1.27 |
| Match: | 2da6A |
| Description: | No description for 2da6A was found. |
|
Region A: Residues: [112-271] |
1 11 21 31 41 51
| | | | | |
1 THMTGNLPGM TPAPSGSLVP GVMRSGSDNS YLEFEAKSAR DGAWYDVQAF LAHRNLEIGD 60
61 PEVQVRFAGF EVEEDEWINV KKHVRQRSLP CEASECVAVL AGDLVLCFQE GKDQALYFDA 120
121 IVLDAQRRRH DVRGCRCRFL VRYSHDQSEE IVPLRKICRR
|
| Detection Method: | |
| Confidence: | 0.96 |
| Match: | 2ekoA |
| Description: | No description for 2ekoA was found. |
|
Region A: Residues: [272-348] |
1 11 21 31 41 51
| | | | | |
1 PETDYRLQQL HNAVNDLANS NQHQIPALDA AAKTPLSLPG ATVPIVAPES KDPSLSATPA 60
61 TLVQPSSNAA TVPAGSA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.728 | a.65.1 | Annexin |
| View | Download | 0.728 | a.65.1 | Annexin |
| View | Download | 0.702 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.667 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.634 | a.64.1 | Saposin |
| View | Download | 0.621 | d.52.8 | Description not found. |
| View | Download | 0.569 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.569 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.527 | a.4.5 | "Winged helix" DNA-binding domain |
