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View Structure Prediction Details

Protein: gi|16649027, gi|...
Organism: Arabidopsis thaliana
Length: 306 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16649027, gi|....

Description E-value Query
Range
Subject
Range
gi|83848494, gi|... - gi|83857127|ref|ZP_00950655.1| hypothetical protein CA2559_10023 [Croceibacter atlanticus HTCC2559],...
235.0 [0..56] [294..7]

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Predicted Domain #1
Region A:
Residues: [1-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVSMLDSSW SFRLSSKMSP SPTQKLASSL TERDPISLNL RFDHSIRAYS ARALKCRSVK  60
   61 SEDFVERSSP FEVKKELEIC FDLVHRLGRG IVYLGSARIP PNHSHYLQAQ ELSREAATLL 120
  121 DCTTWSGAGP GLMDAVTEGA LEAEKPVGGI KIEKEAGEWT ASKFHPYLPP QNYHTCRFFS 180
  181 ARKHGLVDAV IRNNVSEKTA IIALPGGIGT LDEMFEILAL IQLERIGSAL PVPFIVMNYD 240
  241 AFYSKLLEFI ETCENLGTVS KGEVSALWKV CNNNFEALTY LAEFYDLPDG SAKLETELRK 300
  301 TTPTRG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.154902
Match: 2pmbA
Description: No description for 2pmbA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle