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View Structure Prediction Details

Protein: IPPK_ARATH
Organism: Arabidopsis thaliana
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPPK_ARATH.

Description E-value Query
Range
Subject
Range
gi|145335995, gi... - gi|91805827|gb|ABE65642.1| hypothetical protein At1g22100 [Arabidopsis thaliana], gi|145335995|ref|N...
517.0 [0..2] [442..3]
gi|114625566, gi... - gi|114625566|ref|XP_001146962.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes], gi|114...
475.0 [0..3] [440..1]
IPPK - inositol 1,3,4,5,6-pentakisphosphate 2-kinase
473.0 [0..3] [440..1]
gi|109112300 - gi|109112300|ref|XP_001103030.1| PREDICTED: similar to inositol 1,3,4,5,6-pentakisphosphate 2-kinase...
471.0 [0..3] [440..1]
gi|73947199 - gi|73947199|ref|XP_541331.2| PREDICTED: similar to chromosome 9 open reading frame 12 [Canis familia...
469.0 [0..3] [440..204]
IPPK_MOUSE - Inositol-pentakisphosphate 2-kinase OS=Mus musculus GN=Ippk PE=2 SV=1
467.0 [0..3] [439..1]
IPPK_RAT - Inositol-pentakisphosphate 2-kinase OS=Rattus norvegicus GN=Ippk PE=2 SV=1
463.0 [0..3] [439..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMILEEKDA SDWIYRGEGG ANLVLAYAGS SPLFVGKVIR IQKARRNDKA IKNANGVVSV  60
   61 LTSDEQHLWR ENNELISSPN KEVLEQRYVK NVIIPLLGPK HVDAGVRVSV SKEFLECVDK 120
  121 KVTKQRPLWR VNAANVDTSH DSALILNDHS LFSQGISSGG DCISVEIKPK CGFLPTSRFI 180
  181 GKENMLKTSV SRFKMHQLLK LEYNEISEES EYDPLDLFSG 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [221-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKESVLEAIK ALYSTPQNNF RVFLNGSLIL GGSGESTGRT SPEIGYAFED ALKGFIQSED  60
   61 GHR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.873 d.58.4 Dimeric alpha+beta barrel
View Download 0.814 d.52.3 Prokaryotic type KH domain (KH-domain type II)
View Download 0.789 d.52.3 Prokaryotic type KH domain (KH-domain type II)
View Download 0.785 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.782 d.52.1 Alpha-lytic protease prodomain
View Download 0.769 d.52.1 Alpha-lytic protease prodomain
View Download 0.763 d.58.17 Metal-binding domain
View Download 0.724 d.186.1 Head-to-tail joining protein W, gpW
View Download 0.724 d.186.1 Head-to-tail joining protein W, gpW
View Download 0.688 d.58.17 Metal-binding domain
View Download 0.660 d.58.3 Protease propeptides/inhibitors
View Download 0.470 d.74.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View Download 0.413 d.58.3 Protease propeptides/inhibitors
View Download 0.356 d.58.4 Dimeric alpha+beta barrel
View Download 0.316 a.159.4 Description not found.

Predicted Domain #3
Region A:
Residues: [284-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TECFLQLVSD AVYGSGVLDR LLEIQKLDKL DIEGAIHSYY DLINQPCPIC KEGKPLEAEL  60
   61 SLHALPLDES LKIVKEYLIA ATAKDCSIMI SFQSRNAWDS EPSGDYVSLK PTNQTFDYKV 120
  121 HFIDLSLKPL KRMESYYKLD KKIISFYNRK QKAENTAEQI GNSKPSHS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle