| Protein: | gi|20259906, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 480 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20259906, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
615.0 | [0..1] | [480..1] |
|
|
449.0 | [0..153] | [479..1] |
|
|
421.0 | [0..108] | [479..24] |
|
|
421.0 | [0..108] | [479..29] |
|
|
419.0 | [0..115] | [479..38] |
|
|
419.0 | [0..115] | [479..38] |
|
|
418.0 | [0..115] | [479..38] |
|
|
412.0 | [0..115] | [479..38] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MWKYGLRIAA GNAKLNRKSS ILNNTVCHFS PPTSAAVGTL FPSLDHVHRC FSSSKSTKSS 60
61 ITKTKKSEGK KSKPKGGDPG AAGAEEGEFG AAGGDDLEAG RAKRLADDEK IPSLDVGPNG 120
121 R
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [122-169] |
1 11 21 31 41 51
| | | | | |
1 PLFTPKDTTL SQLTHKDIGS YFKFDEAALK AVLPEGLASG IEDEFNES
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.594 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.594 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.531 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.531 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.424 | N/A | N/A | a.2.12 | Description not found. |
| View | Download | 0.398 | N/A | N/A | a.10.2 | Description not found. |
| View | Download | 0.355 | N/A | N/A | a.217.1 | Description not found. |
| View | Download | 0.299 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.277 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.277 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.254 | N/A | N/A | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.204 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
|
Region A: Residues: [170-258] |
1 11 21 31 41 51
| | | | | |
1 WRPALLVRKS YLALRDNFRR IADPPMWPSD SKGVKLQKQI VLDGPVKCGK SIALAMLVHW 60
61 ARDEGWLVLY APKGRDWTHG GYFYKNPHT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [259-372] |
1 11 21 31 41 51
| | | | | |
1 GFWDTPLQAE NILKDFVKFN ESRLRELRCK IHDPIVLGEG AGVGYLKGAD AMPIPEDSTL 60
61 YDLVQMGIKS THAAVNVVVR LRKELSVVKD VPVLIVIDQY NSWFTFSEFE EPVT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.738 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.729 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.729 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.635 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.635 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.635 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.635 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.625 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.576 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
|
Region A: Residues: [373-480] |
1 11 21 31 41 51
| | | | | |
1 PRSCRPIHAR ELTTVNAFRS MMHEDMMVGA FSHSTAVGKL RKDLPDVPVD ARQQFPRYSL 60
61 DEAEAVCYYY LRQRLVRREV FNEENWKKIY YLANGNGAEM RWLAPFMR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.661 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.586 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.548 | a.77.1 | DEATH domain |
| View | Download | 0.548 | a.77.1 | DEATH domain |
| View | Download | 0.423 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.400 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.385 | c.49.1 | Pyruvate kinase, C-terminal domain |
| View | Download | 0.325 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.288 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.228 | d.77.1 | Ribosomal protein L5 |
| View | Download | 0.214 | d.150.1 | 4'-phosphopantetheinyl transferase |
