| Protein: | gi|20198279, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 291 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20198279, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
351.0 | [0..1] | [291..1] |
|
Region A: Residues: [1-193] |
1 11 21 31 41 51
| | | | | |
1 MIVLKWLFLT ISPCDAAEPW QLGSQDAATP IMQGIIDLHH DIFFFLILIL VFVLWILVRA 60
61 LWHFHYKKNA IPQRIVHGTT IEILRTIFPC FISIFIVEPS FALALDDAAE ALFPNTAPTP 120
121 SNTSSSEDSF GLSVLSEPWP ITRNLGLESS ICNRIRLLEA ANSPFLLGKE KGQYWGEIQE 180
181 CLYNVSEQRE YYR
|
| Detection Method: |  |
| Confidence: | 47.69897 |
| Match: | 1occB |
| Description: | Cytochrome c oxidase; Mitochondrial cytochrome c oxidase, subunit II |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [194-291] |
1 11 21 31 41 51
| | | | | |
1 LLDFENRDLQ IRERKHSCLE VFRGVLLRNP YLEERAAYSP QEAFFDFLNE RRDALDISNP 60
61 GSSPAEMDRL EILFLGEIER DLLRRGDESL YIKQLLGD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.715 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.691 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.577 | a.118.14 | FliG |
| View | Download | 0.555 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.478 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
