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View Structure Prediction Details

Protein: gi|20198126, gi|...
Organism: Arabidopsis thaliana
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20198126, gi|....

Description E-value Query
Range
Subject
Range
gi|26556999, gi|... - gi|50198828|gb|AAT70446.1| At2g07771 [Arabidopsis thaliana], gi|48310003|gb|AAT41735.1| At2g07681 [A...
213.0 [0..1] [256..1]

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Predicted Domain #1
Region A:
Residues: [1-177]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSLLQPSF LMSKTRSYAQ ILIGSWLFLT AMAIHLSLGV APLDLQQGGN SRILYVHVPA  60
   61 ARMSIIVYIA TAINTFLFLL TKHPLYLRSS GTGIEMGAFF TLFTLVTGGF RGRPMWGTFW 120
  121 VWDARLTSVF ISFLIYLGAL RFQKLPVEPA SISIRAGPID IPIIKSSVNW WNTSHQP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 38.136677
Match: PF01578.11
Description: No description for PF01578.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [178-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSISRSSTSI HVPMPIPILS NFANFPFSTR ILFVLETRLP IPSFLESPIT EEIEAREGIP  60
   61 KPSSLALFAS MAEWLKRPT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.895 a.74.1 Cyclin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle